Now I am running a 4th axis and you are not but that is irrelevant for basic function of the 3 axis.
My e stop is not wired in on this set up.
I have pulleys on y,x,a axis
Direct drive on x axis.
Ball screws are 5 turns to an inch.(I think)
Hope this helps.
Check PM for further
Thanks for all the pics
I had about a half hour this evening to mess with it.
I basically had it set like yours but the Step & Dir Pulse on mine were at 0, I put them both to 5 and the motors seem a lot smoother. I'll have to mess with the Motor Movement Profiles (those blue pyramid lines) a little to see what that does, all three of mine are in the upper 30's for the velocity and I don't remember where the "Time" is set at.
Thanks again, and I'll post more when I get time to mess with it again.